Assemblies in NCBI Build 36
The following labels are used in Ensembl FASTA files etc to identify
the various assemblies included in build NCBI 36:
- reference
- Human Genome Sequencing Consortium finished genome,
release 4.
- Celera
- Celera Genomics whole genome shotgun assembly (AADB),
November 2001. This assembly included both WGS and BAC
sequence data.
- CRA_TCAGchr7v2
- The Center for Applied Genomics at the Hospital for
Sick Children (Toronto) chromosome 7 assembly, (April
2004).
- DR53
- DR53 haplotype for the MHC region on chromosome 6.
- c5_H2
- An alternate assembly for part of chromosome 5.
- c6_COX
- An alternate haplotype assembly of the chromosome 6
MHC region based on sequence data from the COX
library.
- c6_QBL
- An alternate haplotype assembly of the chromosome 6
MHC region based on sequence data from the QBL
library.
- c22_H2
- An alternate assembly for part of chromosome 22.
